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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917245.1_cds_XP_016466869.1_59681
CDS Infomation

[gene=LOC107789546] [db_xref=GeneID:107789546] [protein=vacuolar protein sorting-associated protein 35A-like] [protein_id=XP_016466869.1] [location=join(26767..26940,27791..27987,28461..28548,28749..28805,28904..28993,29102..29224,29639..29713,29786..29845,30334..30450,30712..30951,31040..31105,31257..31346,32631..32720,32992..33081,33336..33404,33496..33576,33713..33820,33919..34022,34259..34372,34476..34686)] [gbkey=CDS]
Sequence

ATGATTTCTTCTGTTGGGGGATGGGCAAGAGTGATGGTATTTTCAGTAAAGTCGAGCTAT
CAGTTAATGGTTAAGAACAGGGCTGAAAACAGTGCAGATTGGTCATGGAAATTGCTGTGG
AAAACTAAAGCCCCAACCGAAGTTGCTTGTTTCGTTTGGGTAGCAGCACCTGAGTTGTTT
CTCAGGTATCTCCTATGCACAGTGGGGTCTGTGTACATCAAATCCAAGGAGGCGCCTGCC
AAGGATATTCTTAAAGATCTGGTTGAAATGTGCCGTGGTATACAACATCCTTTGCGTGGG
CTCTTCCTGAGGAGTTATCTTTCTCAAGTCAGCAAGGATAAAATACCTGATATAGGTTCT
GAGTATGAAGGGGATGCTGAAACTGTTGTGGATGCTGTAGAGTTTGTTCTCCAAAATTTC
ACGGAAATGAACAAACTCTGGGTTAGAATGCAACATCAGGGACCTGCTCGCGAAAAGGAG
AAACGAGAAAAAGAAAGGAGCGAGCTTCGTGATCTCGTTGGGAAGAACCTGCATGTTCTC
AGTCAAATAGAAGGAATCGACCTGGAGATGTACAAAGAGACCGTGCTTCCAAGAATTTTA
GAGCAGGTTGTCAATTGTAAAGATGAGATTGCACAGGGATATTTGATGGATTGCATAATT
CAAGTCTTCCCTGATGAATATCACTTACAAACTCTTGAAACATTATTGGGTGCTTGTCCC
CAGCTTCAGCCATCTGTTGATATCAAGATGGTGCTTGCTCGGCTGATGGAAAGGCTCTCA
AACTATGCTGCTTTAAGTACAGATGTCTTACCAGAGTTTTTCCAAGTGGAAGCTTTTGCA
AAACTAAATAATGCCATAGGGAAGGTGATAGAAGCACAAGAAGACATGCCTATTGCTGGA
GTTGTGACTTTATATTCATCTCTTCTAACTTTTACTCTTCATGTCCACCCTGATCGTCTT
GATTATGTGGATCAGATCTTGGGTGCATGTGTTAAGAAACTTTCTGGTAAAGGAAAGCTC
AAAGACAGTAAAGCAACAAAACAGACTGTGGCCCTTTTAAGTGCTCCACTGGAGAAGTAT
AAGGATATTGATACTGCATTAAAGCTGTCAAATTATCCTCATGTTATGGAGTACCTTGAT
GATGCAACTAGTAAAGAGATGGCTAATGTTTTAGTTCAAACTATTTTAAAAAGTAAGACT
TGCATCTCGACAGCTGAAAAGGTAGAGGCACTTTTTGAACTAATGAAAGGACTTATCAGA
GATTTGGATGAGAATATTCATGATGAGCTTGACGAAGAAGATTTCAAGGAAGAGCAGAAC
TCTGTTGCACGGCTTATTCAAATGCTTCACAATGACGACCCTGAAGAGATGCTGAAGATA
ATTTCTACTGTGAAGAAGCATATTCTGACAGGAGGACCGAAGAGGCTTCCCTTTACTGCC
CCTCCCCTTATTTTCAATTCTCTTAAGTTGGTTAGGCGACTGCAGAACCAAGATGAAAAT
GCTCCAGAGGAAGAGGCATCTGCTATGCCTAAGAAAATTTTTCAGATTTTAAATCAGATA
ATTGAGGCTCTCTCAAGTGTTCCAGTACCTGAACTAGCATTGAGGTTGTACTTGGAGTGT
GCTGAGGCTGCCAATGACGCTGACCTAGAGCCTGTTGCCTACGAATTTTTCACCCAAGCT
TATATACTATACGAAGAAGAAATTTCGGACTCCAAAGCTCAGGTGACTGCAATACACTTA
ATAATAGGGACTCTTCAGAGAATGCATGTCTTTGGTGTTGAGAACAGGGACACTTTAACG
CACAAGGCCACAGGGTACTCGGCAAAACTCCTGAAGAAGCCTGATCAGTGCAAAGCTGTG
TACTCCTGTTCGCATCTTTTCTGGGTTGATGATCAGGACAGCATCAAGGATGGAGAGAGG
GTTTTGCTTTGCTTAAAACGGGCTTTAAGAATTGCGAATGCTGCTCAACAAATGTCCAAC
GCAACCCGAGGCAGCAGTGGATCAGTCTTGCTCTTTATAGAAATTCTAAACAAGTATTTA
TATTTCTTTGAGAAGGGGGTGACACAGATCACAGTTGCATCCATCCAGAGCCTGATTGAG
CTAATAACAACTGAAATGCAAAGTGAAAACACAACTTCGGATCCTGCTGCAGATGATTTC
CTTGCAAGCACATTACGATATATCCAGTTCCAGAAGGATAAAGGTGGAGCAGTTGGTGAG
AAATATGAATCCATCAAGTCTTAG

Peptide Sequence

PEP ID

XP_016466869.1
PEP Infomation

PREDICTED: vacuolar protein sorting-associated protein 35A-like [Nicotiana tabacum]
Sequence

MISSVGGWARVMVFSVKSSYQLMVKNRAENSADWSWKLLWKTKAPTEVACFVWVAAPELF
LRYLLCTVGSVYIKSKEAPAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSKDKIPDIGS
EYEGDAETVVDAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVL
SQIEGIDLEMYKETVLPRILEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLGACP
QLQPSVDIKMVLARLMERLSNYAALSTDVLPEFFQVEAFAKLNNAIGKVIEAQEDMPIAG
VVTLYSSLLTFTLHVHPDRLDYVDQILGACVKKLSGKGKLKDSKATKQTVALLSAPLEKY
KDIDTALKLSNYPHVMEYLDDATSKEMANVLVQTILKSKTCISTAEKVEALFELMKGLIR
DLDENIHDELDEEDFKEEQNSVARLIQMLHNDDPEEMLKIISTVKKHILTGGPKRLPFTA
PPLIFNSLKLVRRLQNQDENAPEEEASAMPKKIFQILNQIIEALSSVPVPELALRLYLEC
AEAANDADLEPVAYEFFTQAYILYEEEISDSKAQVTAIHLIIGTLQRMHVFGVENRDTLT
HKATGYSAKLLKKPDQCKAVYSCSHLFWVDDQDSIKDGERVLLCLKRALRIANAAQQMSN
ATRGSSGSVLLFIEILNKYLYFFEKGVTQITVASIQSLIELITTEMQSENTTSDPAADDF
LASTLRYIQFQKDKGGAVGEKYESIKS

Transcript Sequence

Gene sequence data has not been registered.